Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX359249: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-271635' containing sample 'Staphylococcus aureus M0145'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.4M spots, 887M bases, 393.5Mb downloads

UUID: 702b0e91-d5a0-4bd7-846b-62cc3f4248b0

Design: Illumina sequencing of Staphylococcus aureus M0145 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216260 • SRP030327 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0145

SAMN02325215 • SRS486910 • All experiments • All runs

Organism: Staphylococcus aureus M0145

Library:

Name: Pond-271635

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385036.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHK9

material_type: DNA:DNA Somatic

product_order: PDO-1797

product_part_number: P-WG-0004

project: G44550

research_project: RP-433

root_sample_id: SM-4C5CA

sample_id: SM-4RHK9

work_request: 37546

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-16 20:54:12.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.4M spots, 887M bases, 393.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001696	2,185,876	441.5M	196Mb	2013-09-24
SRR1001697	2,205,026	445.4M	197.5Mb	2013-09-24

ID:: 507550

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